Merja Penttilä

Peer-reviewed scientific articles

Journal article-refereed, Original research

Elastic and pH responsive hybrid interfaces created with engineered resilin and nanocellulose

Fang, Wenwen; Paananen, Arja; Vitikainen, Marika; Koskela, Salla; Westerholm-Parvinen, Ann; Joensuu, Jussi J.; Landowski, Christopher P.; Penttilä, Merja; Linder, Markus; Laaksonen, Päivi

2017 in BIOMACROMOLECULES (AMER CHEMICAL SOC)

ISSN: 1525-7797

Single-Molecule Force Spectroscopy Study on Modular Resilin Fusion Protein

Griffo, Alessandra; Hähl, Hendrik ; Grandthyll, Samuel ; Müller, Frank ; Paananen, Arja; Ilmen, Marja; Szilvay, Géza R.; Landowski, Christopher P.; Penttilä, Merja; Jacobs, Karin; Laaksonen, Päivi

2017 in ACS Omega (American Chemical Society)

ISSN: 2470-1343

Xylose-induced dynamic effects on metabolism and gene expression in engineered Saccharomyces cerevisiae in anaerobic glucose-xylose cultures

Alff-Tuomala, Susanne; Salusjärvi, Laura; Barth, Dorothee; Oja, Merja; Penttilä, Merja; Pitkänen, Juha-Pekka; Ruohonen, Laura; Jouhten, Paula

2016 in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (SPRINGER)

ISSN: 0175-7598

Characterization and mutagenesis of two novel iron-sulphur cluster pentonate dehydratases

Andberg, Martina; Aro-Kärkkäinen, Niina; Carlson, Paul; Oja, Merja; Bozonnet, Sophie; Toivari, Mervi; Hakulinen, Nina; O'Donohue, Michael; Penttilä, Merja; Koivula, Anu

2016 in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (SPRINGER)

ISSN: 0175-7598

Characterization of a unique Caulobacter crescentus aldose-aldose oxidoreductase having dual activities

Andberg, Martina; Maaheimo, Hannu; Kumpula, Esa-Pekka; Boer, Harry; Toivari, Mervi; Penttilä, Merja; Koivula, Anu

2016 in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (SPRINGER)

ISSN: 0175-7598

Machine learning of protein interactions in fungal secretory pathways

Kludas, Jana; Arvas, Mikko; Castillo, Sandra; Pakula, Tiina; Oja, Merja; Brouard, Céline; Jäntti, Jussi; Penttilä, Merja; Rousu, Juho

2016 in PLOS ONE (PUBLIC LIBRARY SCIENCE)

ISSN: 1932-6203

Production and applications of carbohydrate-derived sugar acids as generic biobased chemicals

Mehtiö, Tuomas; Toivari, Mervi; Wiebe, Marilyn G.; Harlin, Ali; Penttilä, Merja; Koivula, Anu

2016 in CRITICAL REVIEWS IN BIOTECHNOLOGY (TAYLOR & FRANCIS LTD)

ISSN: 0738-8551

Genome wide analysis of protein production load in Trichoderma reesei

Pakula, Tiina M.; Nygren, Heli; Barth, Dorothee; Heinonen, Markus; Castillo, Sandra; Penttilä, Merja; Arvas, Mikko

2016 in BIOTECHNOLOGY FOR BIOFUELS (BIOMED CENTRAL LTD)

ISSN: 1754-6834

Synthetic transcription amplifier system for orthogonal control of gene expression in saccharomyces cerevisiae

Rantasalo, Anssi; Czeizler, Elena; Virtanen, Riitta; Rousu, Juho; Lähdesmäki, Harri; Penttilä, Merja; Jäntti, Jussi; Mojzita, Dominik

2016 in PLOS ONE (PUBLIC LIBRARY SCIENCE)

ISSN: 1932-6203

The Use of Carbohydrate Binding Modules (CBMs) to Monitor Changes in Fragmentation and Cellulose Fiber Surface Morphology during Cellulase- and Swollenin-induced Deconstruction of Lignocellulosic Substrates

Gourlay, Keith; Hu, Jinguang; Arantes, Valdeir; Penttilä, Merja; Saddler, Jack N.

2015 in JOURNAL OF BIOLOGICAL CHEMISTRY (AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC)

ISSN: 0021-9258

Metabolic engineering of the fungal D-galacturonate pathway for L-ascorbic acid production

Kuivanen, Joosu; Penttilä, Merja; Richard, Peter

2015 in MICROBIAL CELL FACTORIES (BIOMED CENTRAL LTD)

ISSN: 1475-2859

Enabling Low Cost Biopharmaceuticals A Systematic Approach to Delete Proteases from a Well-Known Protein Production Host Trichoderma reesei

Landowski, Christopher P.; Huuskonen, Anne; Wahl, Ramon; Westerholm-Parvinen, Ann; Kanerva, Anne; Hanninen, Anna-Liisa; Salovuori, Noora; Penttilä, Merja; Natunen, Jari; Ostermeier, Christian; Helk, Bernhard; Saarinen, Juhani; Saloheimo, Markku

2015 in PLOS ONE (PUBLIC LIBRARY SCIENCE)

ISSN: 1932-6203

Overexpression of PAD1 and FDC1 results in significant cinnamic acid decarboxylase activity in Saccharomyces cerevisiae

Richard, Peter; Viljanen, Kaarina; Penttilä, Merja

2015 in AMB EXPRESS (BIOMED CENTRAL LTD)

ISSN: 2191-0855

Structure and function of Caulobacter crescentus aldose-aldose oxidoreductase

Taberman, Helena; Andberg, Martina; Koivula, Anu; Hakulinen, Nina; Penttilä, Merja; Rouvinen, Juha; Parkkinen, Tarja

2015 in BIOCHEMICAL JOURNAL (PORTLAND PRESS LTD)

ISSN: 0264-6021

A novel aldose-aldose oxidoreductase for co-production of D-xylonate and xylitol from D-xylose with Saccharomyces cerevisiae

Wiebe, Marilyn G.; Nygård, Yvonne; Oja, Merja; Andberg, Martina; Ruohonen, Laura; Koivula, Anu; Penttilä, Merja; Toivari, Mervi

2015 in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (SPRINGER)

ISSN: 0175-7598

Investigation of protein secretion and secretion stress in Ashbya gossypii

Aguiar, Tatiana Q.; Ribeiro, Orquidea; Arvas, Mikko; Wiebe, Marilyn G.; Penttilä, Merja; Domingues, Luclia

2014 in BMC GENOMICS (BIOMED CENTRAL LTD)

ISSN: 1471-2164

Categorisation of sugar acid dehydratases in Aspergillus niger

Motter, Francine A.; Kuivanen, Joosu; Keränen, Hanna; Hilditch, Satu; Penttilä, Merja; Richard, Peter

2014 in FUNGAL GENETICS AND BIOLOGY (ACADEMIC PRESS INC ELSEVIER SCIENCE)

ISSN: 1087-1845

Single cell and in vivo analyses elucidate the effect of xylC lactonase during production of D-xylonate in Saccharomyces cerevisiae

Nygård, Yvonne; Maaheimo, Hannu; Mojzita, Dominik; Toivari, Mervi; Wiebe, Marilyn; Resnekov, Orna; Pesce, C. Gustavo; Ruohonen, Laura; Penttilä, Merja

2014 in METABOLIC ENGINEERING (ACADEMIC PRESS INC ELSEVIER SCIENCE)

ISSN: 1096-7176

Comparative Genome-Scale Reconstruction of Gapless Metabolic Networks for Present and Ancestral Species

Pitkänen, Esa; Jouhten, Paula; Hou, Jian; Fahad Syed, Muhammad; Blomberg, Peter; Kludas, Jana; Oja, Merja; Holm, Liisa; Penttilä, Merja; Rousu, Juho

2014 in PLOS COMPUTATIONAL BIOLOGY (Public Library of Science)

ISSN: 1553-734X

The role of CRE1 in nucleosome positioning within the cbh1 promoter and coding regions of Trichoderma reesei

Ries, L.; Belshaw, N. J.; Ilmen, M.; Penttilä, M. E.; Alapuranen, M.; Archer, D. B.

2014 in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (SPRINGER)

ISSN: 0175-7598

Xylanase XYN IV from Trichoderma reesei showing exo- and endo-xylanase activity

Tenkanen, Maija; Vrsanska, Maria; Siika-aho, Matti; Wong, Dominic W.; Puchart, Vladimir; Penttilä, Merja; Saloheimo, Markku; Biely, Peter

2013 in FEBS JOURNAL (BLACKWELL PUBLISHING)

ISSN: 1742-464X

Noninvasive High-Throughput Single-Cell Analysis of the Intracellular pH of Saccharomyces cerevisiae by Ratiometric Flow Cytometry

Valkonen, Mari; Mojzita, Dominik; Penttilä, Merja; Bencina, Mojca

2013 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

Single-Cell Measurements of Enzyme Levels as a Predictive Tool for Cellular Fates during Organic Acid Production

Zdraljevic, Stefan; Wagner, Drew; Cheng, Kevin; Ruohonen, Laura; Jäntti, Jussi; Penttilä, Merja; Resnekov, Orna; Pesce, C. Gustavo

2013 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

Correlation of gene expression and protein production rate - a system wide study

Arvas, Mikko; Pakula, Tiina; Smit, Bart; Rautio, Jari; Koivistoinen, Heini; Jouhten, Paula; Lindfors, Erno; Wiebe, Marilyn; Penttilä, Merja; Saloheimo, Markku

2011 in BMC GENOMICS (BIOMED CENTRAL LTD)

ISSN: 1471-2164

High level secretion of cellobiohydrolases by Saccharomyces cerevisiae

Ilmen, Marja; den Haan, Riaan; Brevnova, Elena; McBride, John; Wiswall, Erin; Froehlich, Allan; Koivula, Anu; Voutilainen, Sanni P.; Siika-Aho, Matti; la Grange, Daniel C.; Thorngren, Naomi; Ahlgren, Simon; Mellon, Mark; Deleault, Kristen; Rajgarhia, Vineet; van Zyl, Willem H.; Penttilä, Merja

2011 in BIOTECHNOLOGY FOR BIOFUELS (BIOMED CENTRAL LTD)

ISSN: 1754-6834

Transformation System for Hypocrea jecorina (Trichoderma reesei) That Favors Homologous Integration and Employs Reusable Bidirectionally Selectable Markers

Steiger, Matthias G.; Vitikainen, Marika; Uskonen, Pekka; Brunner, Kurt; Adam, Gerhard; Pakula, Tiina; Penttilä, Merja; Saloheimo, Markku; Mach, Robert L.; Mach-Aigner, Astrid R.

2011 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

Detecting novel genes with sparse arrays

Arvas, Mikko; Haiminen, Niina; Smit, Bart; Rautio, Jari; Vitikainen, Marika; Wiebe, Marilyn; Martinez, Diego; Chee, Christine; Kunkel, Joe; Sanchez, Charles; Nelson, Mary Anne; Pakula, Tiina; Saloheimo, Markku; Penttilä, Merja; Kivioja, Teemu

2010 in GENE (Elsevier Science B.V.)

ISSN: 0378-1119

Integrated multilaboratory systems biology reveals differences in protein metabolism between two reference yeast strains

Canelas, Andre B.; Harrison, Nicola; Fazio, Alessandro; Zhang, Jie; Pitkanen, Juha-Pekka; van den Brink, Joost; Bakker, Barbara M.; Bogner, Lara; Bouwman, Jildau; Castrillo, Juan I.; Cankorur, Ayca; Chumnanpuen, Pramote; Daran-Lapujade, Pascale; Dikicioglu, Duygu; van Eunen, Karen; Ewald, Jennifer C.; Heijnen, Joseph J.; Kirdar, Betul; Mattila, Ismo; Mensonides, Femke I. C.; Niebel, Anja; Penttilä, Merja; Pronk, Jack T.; Reuss, Matthias; Salusjarvi, Laura; Sauer, Uwe; Sherman, David; Siemann-Herzberg, Martin; Westerhoff, Hans; de Winde, Johannes; Petranovic, Dina; Oliver, Stephen G.; Workman, Christopher T.; Zamboni, Nicola; Nielsen, Jens

2010 in NATURE COMMUNICATIONS (NATURE PUBLISHING GROUP)

ISSN: 2041-1723

A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology

Herrgard, Markus J.; Swainston, Neil; Dobson, Paul; Dunn, Warwick B.; Arga, K. Yalcin; Arvas, Mikko; Bluethgen, Nils; Borger, Simon; Costenoble, Roeland; Heinemann, Matthias; Hucka, Michael; Le Novere, Nicolas; Li, Peter; Liebermeister, Wolfram; Mo, Monica L.; Oliveira, Ana Paula; Petranovic, Dina; Pettifer, Stephen; Simeonidis, Evangelos; Smallbone, Kieran; Spasic, Irena; Weichart, Dieter; Brent, Roger; Broomhead, David S.; Westerhoff, Hans V.; Kirdar, Betuel; Penttilä, Merja; Klipp, Edda; Palsson, Bernhard O.; Sauer, Uwe; Oliver, Stephen G.; Mendes, Pedro; Nielsen, Jens; Kell, Douglas B.

2008 in NATURE BIOTECHNOLOGY (NATURE PUBLISHING GROUP)

ISSN: 1087-0156

Identification in the mould Hypocrea jecorina of a gene encoding an NADP(+) D-xylose dehydrogenase

Berghäll, Suvi; Hilditch, Satu; Penttilä, Merja; Richard, Peter

2007 in FEMS MICROBIOLOGY LETTERS (Elsevier Science B.V.)

ISSN: 0378-1097

Monitoring of transcriptional regulation in Pichia pastoris under protein production conditions

Gasser, Brigitte; Maurer, Michael; Rautio, Jari; Sauer, Michael; Bhattacharyya, Anamitra; Saloheimo, Markku; Penttilä, Merja; Mattanovich, Diethard

2007 in BMC GENOMICS (BIOMED CENTRAL LTD)

ISSN: 1471-2164

Interaction and comparison of a class I hydrophobin from Schizophyllum commune and class II Hydrophobins Trichoderma reesei

Askolin, Sanna; Linder, Markus; Scholtmeijer, Karin; Tenkanen, Maija; Penttilä, Merja; de Vocht, Marcel L.; Wösten, Han A B

2006 in BIOMACROMOLECULES (AMER CHEMICAL SOC)

ISSN: 1525-7797

Expression of Vitreoscilla hemoglobin improves the metabolism of xylose in recombinant yeast Saccharomyces cerevisiae under low oxygen conditions

Ruohonen, Laura; Aristidou, Aristos; Frey, Alexander D.; Penttilä, Merja; Kallio, Pauli T.

2006 in ENZYME AND MICROBIAL TECHNOLOGY (BUTTERWORTH-HEINEMANN)

ISSN: 0141-0229

Optimization of cDNA-AFLP experiments using genomic sequence data

Kivioja, T; Arvas, M; Saloheimo, M; Penttilä, Merja; Ukkonen, E

2005 in BIOINFORMATICS (OXFORD UNIV PRESS INC)

ISSN: 1367-4803

Fungal hydrophobins as predictors of the gushing activity of malt

Sarlin, Tuija; Nakari-Setälä, T.; Linder, M.; Penttilä, M.; Haikara, A.

2005 in JOURNAL OF THE INSTITUTE OF BREWING (INST BREWING)

ISSN: 0046-9750

Atomic Resolution Structure of the HFBII Hydrophobin, a Self-assembling Amphiphile

Hakanpää, Johanna; Paananen, Arja; Askolin, Sanna; Nakari-Setälä, Tiina; Parkkinen, Tarja; Penttilä, Merja; Linder, Markus B.; Rouvinen, Juha

2004 in JOURNAL OF BIOLOGICAL CHEMISTRY (AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC)

ISSN: 0021-9258

Efficient purification of recombinant proteins using hydrophobins as tags in surfactant-based two-phase systems

Linder, Markus B.; Qiao, Mingqiang; Laumen, Frank; Selber, Klaus; Hyytiä, Teppo; Nakari-Setälä, Tiina; Penttilä, Merja E.

2004 in BIOCHEMISTRY (AMER CHEMICAL SOC)

ISSN: 0006-2960

Characterization of secretory genes ypt1/yptA and nsf1/nsfA from two filamentous fungi Induction of secretory pathway genes of Trichoderma reesei under secretion stress conditions

Saloheimo, Markku; Wang, Huaming; Valkonen, Mari; Vasara, Tuija; Huuskonen, Anne; Riikonen, Marjukka; Pakula, Tiina ; Ward, Michael; Penttilä, Merja

2004 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

Structural Hierarchy in Molecular Films of Two Class II Hydrophobins

Paananen, Arja; Vuorimaa, Elina; Torkkeli, Mika; Penttilä, Merja; Kauranen, Martti; Ikkala, Olli; Lemmetyinen, Helge; Serimaa, Ritva; Linder, Markus B.

2003 in Biochemistry ACS (AMER SOC MICROBIOLOGY)

The effects of drugs inhibiting protein secretion in the filamentous fungus Trichoderma reesei - Evidence for down-regulation of genes that encode secreted proteins in the stressed cells

Pakula, TM; Laxell, M; Huuskonen, A; Uusitalo, J; Saloheimo, M; Penttilä, Merja

2003 in JOURNAL OF BIOLOGICAL CHEMISTRY (AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC)

ISSN: 0021-9258

Metabolic flux analysis of xylose metabolism in recombinant Saccharomyces cerevisiae using continuous culture

Pitkänen, Juha-Pekka; Aristidou, Aristos; Salusjärvi, Laura; Ruohonen, Laura; Penttilä, Merja

2003 in METABOLIC ENGINEERING (ACADEMIC PRESS INC ELSEVIER SCIENCE)

ISSN: 1096-7176

Proteome analysis of recombinant xylose-fermenting Saccharomyces cerevisiae

Salusjärvi, L; Poutanen, Marjo; Pitkänen, Juha-Pekka; Koivistoinen, H; Aristidou, Aristos; Kalkkinen, Nisse; Ruohonen, Laura; Penttilä, Merja

2003 in YEAST (JOHN WILEY & SONS LTD)

ISSN: 0749-503X

Improvement of foreign-protein production in Aspergillus niger var. awamori by constitutive induction of the unfolded-protein response

Valkonen, Mari; Ward, Michael; Wang, Huaming; Penttilä, Merja; Saloheimo, Markku

2003 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

Process technological effects of deletion and amplification of hydrophobins I and II in transformants of Trichoderma reesei

Bailey, M. J.; Askolin, S.; Hörhammer, N.; Tenkanen, M.; Linder, M.; Penttilä, M.; Nakari-Setälä, T.

2002 in APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (SPRINGER)

ISSN: 0175-7598

A novel two-step extraction method with detergent/polymer systems for primary recovery of the fusion protein endoglucanase I-hydrophobin I

Collén, Anna; Persson, Josefine; Linder, Markus; Nakari-Setälä, Tiina; Penttilä, Merja; Tjerneld, Folke; Sivars, Ulf

2002 in BIOCHIMICA ET BIOPHYSICA ACTA: GENERAL SUBJECTS (Elsevier)

ISSN: 0304-4165

Surface adhesion of fusion proteins containing the hydrophobins HFBI and HFBII from Trichoderma reesei

Linder, Markus; Szilvay, Geza R.; Nakari-Setälä, Tiina; Söderlund, Hans; Penttilä, Merja

2002 in PROTEIN SCIENCE (Cold Spring Harbor Laboratory Press)

ISSN: 0961-8368

Expression of a fungal hydrophobin in the Saccharomyces cerevisiae cell wall Effect on cell surface properties and immobilization

Nakari-Setälä, Tiina; Azeredo, Joana; Henriques, Mariana; Oliveira, Rosário; Teixeira, José; Linder, Markus; Penttilä, Merja

2002 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

Swollenin, a Trichoderma reesei protein with sequence similarity to the plant expansins, exhibits disruption activity on cellulosic materials

Saloheimo, M; Paloheimo, M; Hakola, S; Pere, J; Swanson, B; Nyyssonen, E; Bhatia, A; Ward, M; Penttilä, Merja

2002 in EUROPEAN JOURNAL OF BIOCHEMISTRY (Springer-Verlag)

ISSN: 0014-2956

The hydrophobins HFBI and HFBII from Trichoderma reesei showing efficient interactions with nonionic surfactants in aqueous two-phase systems

Linder, M.; Selber, K.; Nakari-Setälä, T.; Qiao, M.; Kula, M. R.; Penttilä, M.

2001 in BIOMACROMOLECULES (AMER CHEMICAL SOC)

ISSN: 1525-7797

Use of matrix-assisted laser desorption/ionization time-of-flight mass mapping and nanospray liquid chromatography/electrospray ionization tandem mass spectrometry sequence tag analysis for high sensitivity identification of yeast proteins separated by two-dimensional gel electrophoresis

Poutanen, Marjo; Salusjärvi, Laura; Ruohonen, Laura; Penttilä, Merja; Kalkkinen, Nisse

2001 in RAPID COMMUNICATIONS IN MASS SPECTROMETRY (JOHN WILEY & SONS LTD)

ISSN: 0951-4198

Crystallization and preliminary X-ray crystallographic analysis of a Trichoderma reesei beta-mannanase from glycoside hydrolase family 5

Sabini, E; Brzozowski, AM; Dauter, M; Davies, GJ; Wilson, KS; Paloheimo, M; Suominen, P; Siika-Aho, M; Penttilä, Merja

1999 in ACTA CRYSTALLOGRAPHICA SECTION D : BIOLOGICAL CRYSTALLOGRAPHY (MUNKSGAARD INT PUBL LTD)

ISSN: 0907-4449

Alpha-galactosidases of Penicillium simplicissimum; production purification and characterization of the gene encoding AglI

Luonteri, E.; Alatalo, E.; Siika-aho, M.; Penttilä, M.; Tenkanen, M.

1998 in Biotechnology and Applied Biochemistry (Wiley-Blackwell)

Yeast agglutination genes and yeast containing them

Watari, Junji; Takata, Yoshihiro; Ogawa, Masahiro; Penttila, Merja; Onnela, Maija Leen; Keranen, Sirkka

1997 in BIOTECHNOLOGY ADVANCES (Elsevier Inc.)

ISSN: 0734-9750

Use of a modified alcohol dehydrogenase, ADH1, promoter in construction of diacetyl non-producing brewer's yeast

Onnela, Maija-Leena; Suihko, Maija-Liisa; Keranen, S; Penttilä, Merja

1996 in JOURNAL OF BIOTECHNOLOGY (Elsevier Science B.V.)

ISSN: 0168-1656

CHARACTERIZATION OF THE GENES OF THE 2,3-BUTANEDIOL OPERONS FROM KLEBSIELLA-TERRIGENA AND ENTEROBACTER-AEROGENES

BLOMQVIST, K; NIKKOLA, M; LEHTOVAARA, P; SUIHKO, ML; AIRAKSINEN, U; STRABY, KB; KNOWLES, JKC; Penttilä, Merja

1993 in JOURNAL OF BACTERIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0021-9193

CHROMOSOMAL INTEGRATION AND EXPRESSION OF 2 BACTERIAL ALPHA-ACETOLACTATE DECARBOXYLASE GENES IN BREWERS-YEAST

BLOMQVIST, K; SUIHKO, ML; KNOWLES, J; Penttilä, Merja

1991 in APPLIED AND ENVIRONMENTAL MICROBIOLOGY (AMER SOC MICROBIOLOGY)

ISSN: 0099-2240

RECOMBINANT BREWERS-YEAST STRAINS SUITABLE FOR ACCELERATED BREWING

SUIHKO, ML; BLOMQVIST, K; Penttilä, Merja; GISLER, R; KNOWLES, J

1990 in JOURNAL OF BIOTECHNOLOGY (Elsevier Science B.V.)

ISSN: 0168-1656

THE APPLICATION OF RECOMBINANT-DNA TECHNOLOGY TO CELLULASES AND LIGNOCELLULOSIC WASTES

KNOWLES, J.; LEHTOVAARA, P.; TEERI, T.; Penttila, M.; SALOVUORI, I.; ANDRE, L.

1987 in PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY A: MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES (ROYAL SOC)

ISSN: 1364-503X

THE CELLULASE GENES OF TRICHODERMA

KNOWLES, J.; LEHTOVAARA, P.; Penttila, M.; TEERI, T.; HARKKI, A.; SALOVUORI, I.

1987 in ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF MICROBIOLOGY (Kluwer Academic Publishers)

ISSN: 0003-6072

Review article, Literature review, Systematic review

Hydrophobins The protein-amphiphiles of filamentous fungi

Linder, Markus B.; Szilvay, Géza R.; Nakari-Setälä, Tiina; Penttilä, Merja E.

2005 in FEMS MICROBIOLOGY REVIEWS (Elsevier Science B.V.)

ISSN: 0168-6445

Conference proceedings

Enzymology of soft-wood hemicellulose hydrolysis; The systems of Aspergillus niger and Trichoderma reesei

Ademark, Pia; Setati, Evodia; Tenkanen, Maija; Penttila, Merja; van Zyl, Emile; Tjerneld, Folke; Stalbrand, Henrik

1998

ISBN: 1-896742-36-X

DEVELOPMENT OF CELLULOLYTIC YEASTS AND THEIR POSSIBLE APPLICATIONS

Knowles, Jonathan; Penttila, Merja; Teeri, Tuula; Andre, Lars; Lehtovaara, Paivi; Salovuori, Irma

1987

ISBN: 084934901X

Patents and invention disclosures

Patent

ENHANCED DIACID PRODUCTION WITH GENETICALLY MODIFIED MICRO-ORGANISMS

KOIVURANTA,, Kari; RUOHONEN,, Laura; NAKARI-SETÄLÄ,, Tiina; PENTTILÄ,, Merja

2016

YEAST EXPRESSING CELLULASES FOR SIMULTANEOUS SACCHARIFICATION AND FERMENTATION USING CELLULOSE

MCBRIDE, JOHN; BREVNOVA, ELENA; MELLON, MARK; FROEHLICH, ALLAN; DELEAULT, KRISTEN; RAJGARHIA, VINEET; DEN HAAN, RIAAN; Penttilä, Merja; ILMEN, MARJA; SIIKA-AHO, MATTI; UUSITALO, JAANA; STONEHOUSE EMILY, A; GILBERT, ALAN; XU, HAOWEN; WILLES, DEIDRE; BARDSLEY, JOHN; KOIVULA, ANU; VOUTILAINEN, SANNI

2016

Production of Fucosylated Glycoproteins

NATUNEN, JARI; WESTERHOLM-PARVINEN, ANN; SALO, HANNA; JOENSUU, JUSSI; VISKARI, HELI; LANDOWSKI, CHRISTOPHER; HUUSKONEN, ANNE; KANERVA, ANNE; HANNINEN, ANNA-LIISA; SALOVUORI, NOORA; Penttilä, Merja; SAARINEN, JUHANI; SALOHEIMO, MARKKU

2015

PRODUCTION OF FUCOSYLATED GLYCOPROTEINS

NATUNEN,, JARI; WESTERHOLM-PARVINEN,, ANN; SALO,, HANNA; JOENSUU,, JUSSI; VISKARI,, HELI; LANDOWSKI,, CHRISTOPHER; HUUSKONEN,, ANNE; KANERVA,, ANNE; HÄNNINEN,, ANNA-LIISA; SALOVUORI,, NOORA; PENTTILÄ,, MERJA; SAARINEN,, JUHANI; SALOHEIMO,, MARKKU

2015

METHOD FOR CULTIVATING YEAST IN LIGNOCELLULOSIC HYDROLYSATE

NYGAARD,, YVONNE; MOJZITA,, DOMINIK; TOIVARI,, MERVI; PENTTILÄ,, MERJA; RUOHONEN,, LAURA; WIEBE,, MARILYN

2015

PROTEASE DEFICIENT FILAMENTOUS FUNGAL CELLS AND METHODS OF USE THEREOF.

PENTTILÄ,, MERJA; SALOHEIMO,, MARKKU; KANERVA,, ANNE; NATUNEN,, JARI; HUUSKONEN,, ANNE; LANDOWSKI,, CHRISTOPHER; SAARINEN,, JUHANI; WESTERHOLM-PARVINEN,, ANN; HÄNNINEN,, ANNA-LIISA; SALOVUORI,, NOORA

2015

MICROBIAL CONVERSION OF SUGAR ACIDS AND MEANS THEREIN

HILDITCH, SATU; PENTTILÄ, MERJA; RICHARD, PETER

2014

Eukaryotic cell and method for producing glycolic acid

KOIVISTOINEN, OUTI; KUIVANEN, JOOSU; RICHARD, PETER; PENTTILÄ, MERJA

2014

EUKARYOTIC CELL AND METHOD FOR PRODUCING GLYCOLIC ACID

KOIVISTOINEN,, OUTI; KUIVANEN,, JOOSU; RICHARD,, PETER; PENTTILÄ,, MERJA

2014

Conversión microbiana de azúcares ácidos y medios útiles para ello

KUORELAHTI,, SATU; PENTTILÄ,, MERJA; RICHARD,, PETER

2014

MIKROBIEL OMDANNELSE AF SUKKERSYRER OG ANORDNING TIL ANVENDELSE DERTIL

KUORELAHTI,, SATU; PENTTILÄ,, MERJA; RICHARD,, PETER

2014

PROTEASE DEFICIENT FILAMENTOUS FUNGAL CELLS AND METHODS OF USE THEREOF

LANDOWSKI,, CHRISTOPHER; HUUSKONEN,, ANNE; SAARINEN,, JUHANI; WESTERHOLM-PARVINEN,, ANN; KANERVA,, ANNE; NATUNEN,, JARI; HÄNNINEN,, ANNA-LIISA; SALOVUORI,, NOORA; PENTTILÄ,, MERJA; SALOHEIMO,, MARKKU

2014

PROTEASE DEFICIENT FILAMENTOUS FUNGAL CELLS AND METHODS OF USE THEREOF

LANDOWSKI,, CHRISTOPHER; HUUSKONEN,, ANNE; SAARINEN,, JUHANI; WESTERHOLM-PARVINEN,, ANN; KANERVA,, ANNE; NATUNEN,, JARI; HÄNNINEN,, ANNA-LIISA; SALOVUORI,, NOORA; PENTTILÄ,, MERJA; SALOHEIMO,, MARKKU

2014

Method for improved protein production in filamentous fungi

PAKULA,, TIINA; SALOHEIMO,, MARKKU; HÄKKINEN,, MARI; WESTERHOLM-PARVINEN,, ANN; PENTTILÄ,, MERJA; VITIKAINEN,, MARIKA

2014

Hapon / happojen ja alkoholin tuotto sokereista käyttämällä hiivaa;Produktion av syra / syror och alkohol från socker med jäst

PENTTILÄ,, Merja; RUOHONEN,, Laura; TOIVARI,, Mervi; SALUSJÄRVI,, Laura

2014

PRODUCTION OF ACID(S) AND ALCOHOL FROM SUGARS USING YEAST

PENTTILÄ,, MERJA; RUOHONEN,, LAURA; TOIVARI,, MERVI; SALUSJÄRVI,, LAURA

2014

METHODS FOR PRODUCING STYRENE AND GENETICALLY MODIFIED MICRO-ORGANISMS RELATED THERETO

RICHARD,, PETER; PENTTILÄ,, MERJA

2014

METHOD FOR PRODUCING TERPENES

BROMANN,, KIRSI; NAKARI-SETAELAE,, TIINA; RUOHONEN,, LAURA; TOIVARI,, MERVI; PENTTILAE,, MERJA; NAKARI-SETÄLÄ,, TIINA; PENTTILÄ,, MERJA

2013

Eukaryottiset solut ja menetelmä glykolihapon valmistamiseksi;Eukaryotiska celler och förfarande för framställning av glykolsyra

KOIVISTOINEN,, OUTI; KUIVANEN,, JOOSU; RICHARD,, PETER; PENTTILAE,, MERJA; PENTTILÄ,, MERJA

2013

CONVERSION OF HEXURONIC ACID TO HEXARIC ACID

BOER, HARRY; HILDICH, SATU; RICHARD, PETER; Penttilä, Merja

2012

Yeast Expressing Cellulases for Simultaneous Saccharification and Fermentation Using Cellulose

MCBRIDE, JOHN; BREVNOVA, ELENA; MELLON, MARK; FROEHLICH, ALLAN; DELEAULT, KRISTEN; RAJGARHIA, VINEET; DEN HAAN, RIAAN; Penttilä, Merja; ILMEN, MARJA; SIIKA-AHO, MATTI; UUSITALO, JAANA; STONEHOUSE EMILY, A; GILBERT, ALAN; XU, HAOWEN; WILLES, DEIDRE; BARDSLEY, JOHN; KOIVULA, ANU; VOUTILAINEN, SANNI

2012

MANUFACTURE OF XYLONIC ACID

RICHARD, PETER; WIEBE, MARILYN; TOIVARI, MERVI; MOJZITA, DOMINIK; RUOHONEN, LAURA; PENTTILAE, MERJA; PENTTILÄ, MERJA

2012

MANUFACTURE OF XYLONIC ACID

RICHARD,, PETER; WIEBE,, MARILYN; TOIVARI,, MERVI; MOJZITA,, DOMINIK; RUOHONEN,, LAURA; PENTTILÄ,, MERJA

2012

CONVERSION OF HEXURONIC ACID TO HEXARIC ACID

BOER,, HARRY; HILDICH,, SATU; RICHARD,, PETER; PENTTILÄ,, MERJA

2011

Engineering Fungi for the Utilisation of L-Arabinose

LONDESBOROUGH, JOHN; Penttilä, Merja; RICHARD, PETER

2009

Manufacture of Five-Carbon Sugars and Sugar Alcohols

MIASNIKOV, ANDREI; OJAMO, HEIKKI; POVELAINEN, MIRA; GROS, HAKAN; TOIVARI, MERVI; RICHARD, PETER; RUOHONEN, LAURA; KOIVURANTA, KARI; LONDESBOROUGH, JOHN; ARISTIDOU, ARISTOS; Penttilä, Merja; PLAZANET-MENUT, CLAIRE; DEUTSCHER, JOSEF

2008

Process for partitioning of proteins

Penttilä, Merja; NAKARI-SETALA, TIINA; FAGERSTROM, RICHARD; SELBER, KLAUS; KULA, MARIA-REGINA; LINDER, MARKUS; TJERNELD, FOLKE; PENTTILAE, MERJA; NAKARI-SETAELAE, TIINA; FAGERSTROEM, RICHARD

2006

ENGINEERING FUNGI FOR THE UTILISATION OF L-ARABINOSE

Londesborough, John; Penttilä, Merja; Richard, Peter

2005

An NADH dependent L-xylulose reductase

PETER, RICHARD; Penttilä, Merja; RITVA, VERHO

2005

FUNGAL MICRO-ORGANISM HAVING AN INCREASED ABILITY TO CARRY OUT BIOTECHNOLOGICAL PROCESS(ES)

Richard, Peter; Verho, Ritva; Londesborough, John; Penttilä, Merja

2005

A method for decreasing the foam formation during cultivation of a microorganism

TIINA, NAKARI-SETALA; Penttilä, Merja; MICHAEL, BAILEY; MAIJA, TENKANEN

2005

Method for the production of xylitol

Ojamo, Heikki; Penttilä, Merja; HEIKKILA, HEIKKI; UUSITALO, JAANA; ILMEN, MARJA; SARKKI, MARJA-LEENA; VEHKOMAKI, MAIJA-LEENA

2004

Manufacture of five-carbon sugars and sugar alcohols

MIASNIKOV, ANDREI; OJAMO, HEIKKI; POVELAINEN, MIRA; GROS, HAKAN; TOIVARI, MERVI; RICHARD, PETER; RUOHONEN, LAURA; KOIVURANTA, KARI; LONDESBOROUGH, JOHN; ARISTIDOU, ARISTOS; Penttilä, Merja; PLAZANET-MENUT, CLAIRE; DEUTSCHER, JOSEF

2003

Process for partitioning of proteins using hydrophobin proteins fused to the cell or protein of choice

Penttilä, Merja; NAKARI-SETALA,, TIINA; FAGERSTROM,RICHARD, ; SELBER,, KLAUS; KULA,, MARIA-REGINA; LINDER,, MARKUS; JERNELD,, FOLKE

2003

ENGINEERING FUNGI FOR THE UTILISATION OF L-ARABINOSE

RICHARD,, PETER; Penttilä, Merja; LONDESBOROUGH,, JOHN

2002

A METHOD FOR DECREASING THE FOAM FORMATION DURING CULTIVATION OF A MICROORGANISM

BAILEY,, MICHAEL; Penttilä, Merja; TENKANEN,, MAIJA; NAKARI-SETALA,, TIINA

2001

Process for modifying glucose repression

ILMÉN, MARJA; SOEDERLUND, HANS; PENTTILÄ, MERJA

2001

MANUFACTURE OF FIVE-CARBON SUGARS AND SUGAR ALCOHOLS

RUOHONEN,, LAURA; RICHARD,, PETER; ARISTIDOU,, ARISTOS; TOIVARI,, MERVI; PLAZANET-MENUT,, CLAIRE; Penttilä, Merja; GROS,, HAKAN; DEUTSCHER,, JOSEF; MIASNIKOV,, ANDREI; KOIVURANTA,, KARI; LONDESBOROUGH,, JOHN; POVELAINEN,, MIRA; OJAMO,, HEIKKI

2001

A method for decreasing the foam formation during cultivation of a microorganism

TIINA, NAKARI-SETALA; Penttilä, Merja; MICHAEL, BAILEY; MAIJA, TENKANEN

2001

LEVADURAS RECOMBINANTES QUE CONTIENEN SECUENCIAS DE ADN QUE CODIFICAN LAS ENZIMAS XILOSA-REDUCTASA Y XILITOL-DESHIDROGENASA.

HALLBORN,, JOHAN; Penttilä, Merja; OJAMO,, HEIKKI; WALFRIDSSON,, MATS; AIRAKSINEN,, ULLA; KERANEN,, SIRKKA

1998

Method of making endoglucanase I

KNOWLES,, JONATHAN; Penttilä, Merja; TEERI,, TUULA; NEVALAINEN,, HELENA; LEHTOVAARA-HELENIUS,, PAEIVI

1996

FUNGAL PROMOTERS ACTIVE IN THE PRESENCE OF GLUCOSE

Nakari, Tiina; Onnela, Maija-Leena; Ilmen, Marja H. ; Penttilä, Merja; Nevalainen, Kaisu M. H.

1994

Fungal promoters active in the presence of glucose

Penttilä, Merja; NAKARI-SETAELAE TIINA, HANNELE; ONNELA,, MAIJA-LEENA; Ilmen, Marja; Nevalainen, Kaisu Maija Helnea

1994

MANNANASE ENZYMES, GENES CODING FOR THEM, METHODS FOR ISOLATING THE GENES, AND METHODS FOR BLEACHING LIGNOCELLULOSIC PULPS

Penttilä, Merja; Buchert, Johanna; Siika-aho, Matti; Viikari, Liisa; Saloheimo, Anu; Ranua, Marjatta

1993

CONSTRUCTION AND CHARACTERIZATION OF CELLULOLYTIC YEASTS.

Penttila, Merja

1987

ISBN: 9513829286

STUDIES ON THE STRUCTURE AND EXPRESSION OF CELLULASE GENES FROM THE FILAMENTOUS FUNGUS TRICHODERMA-REESEI

KNOWLES, J.; LEHTOVAARA, P.; TEERI, T.; Penttila, M.; SALOVUORI, I.

1986 in HEREDITY (BLACKWELL SCIENCE LTD)

ISSN: 0018-067X

TRANSFER OF GENES-CODING FOR FUNGAL GLUCANASES INTO YEAST

KNOWLES, JKC; Penttila, M.; Teeri, T.T.; ANDRE, L.; SALOVUORI, I.; LEHTOVAARA, P

1985 in JOURNAL OF THE INSTITUTE OF BREWING (INST BREWING)

ISSN: 0046-9750