Yangming Ou

Research Interests

• Medical Image Analysis
• Machine Learning; Deep Learning
• Big Data; Data Science
• Imaging Informatics; Imaging Biomarker
• Computational Neuroscience

Education

• BS, Electrical Engineering (Biomedical Engineering Division), Tsinghua University
• MA, Applied Mathematics, University of Pennsylvania
• PhD, Medical Image Analysis, University of Pennsylvania
• Postdoc, Medical Imaging Informatics, Massachusetts General Hospital, Harvard Medical School

Publications from Harvard Catalyst Profiles

• Sotardi S, Gollub RL, Bates SV, Weiss R, Murphy SN, Grant PE, Ou Y. Voxelwise and Regional Brain Apparent Diffusion Coefficient Changes on MRI from Birth to 6 Years of Age. Radiology 2020. PubMed
• Yang J, Dong X, Hu Y, Peng Q, Tao G, Ou Y, Cai H, Yang X. Fully Automatic Arteriovenous Segmentation in Retinal Images via Topology-Aware Generative Adversarial Networks. Interdiscip Sci 2020; 12:323-334. PubMed
• Li S, Eshghi M, Khan S, Tian Q, Joutsa J, Ou Y, Wang QM, Kong J, Rosen BR, Ahveninen J, Nummenmaa A. Localizing central swallowing functions by combining non-invasive brain stimulation with neuroimaging. Brain Stimul 2020; 13:1207-1210. PubMed
• Zöllei L, Iglesias JE, Ou Y, Grant PE, Fischl B. Infant FreeSurfer: An automated segmentation and surface extraction pipeline for T1-weighted neuroimaging data of infants 0-2 years. Neuroimage 2020; 218:116946. PubMed
• He S, Gollub RL, Murphy SN, Perez JD, Prabhu S, Pienaar R, Robertson RL, Grant PE, Ou Y. BRAIN AGE ESTIMATION USING LSTM ON CHILDREN'S BRAIN MRI. Proc IEEE Int Symp Biomed Imaging 2020; 2020:420-423. PubMed
• Yu X, Zuk J, Perdue MV, Ozernov-Palchik O, Raney T, Beach SD, Norton ES, Ou Y, Gabrieli JDE, Gaab N. Putative protective neural mechanisms in prereaders with a family history of dyslexia who subsequently develop typical reading skills. Hum Brain Mapp 2020. PubMed
• Zhao J, Lin G, Zhuo M, Fan Z, Miao L, Chen L, Zeng A, Yin R, Ou Y, Shi Z, Yin J, Gao W, Chen J, Zhou X, Zeng Y, Liu X, Xu H, Chen R, Xia X, Carbone DP. Next-generation sequencing based mutation profiling reveals heterogeneity of clinical response and resistance to osimertinib. Lung Cancer 2020; 141:114-118. PubMed
• Zeng N, Zuo S, Zheng G, Ou Y, Tong T. Editorial: Artificial Intelligence for Medical Image Analysis of Neuroimaging Data. Front Neurosci 2020; 14:480. PubMed
• Wang H, Han G, Li H, Tao G, Zhuo E, Liu L, Cai H, Ou Y. A Collaborative Dictionary Learning Model for Nasopharyngeal Carcinoma Segmentation on Multimodalities MR Sequences. Comput Math Methods Med 2020; 2020:7562140. PubMed
• Weiss RJ, Bates SV, Song Y, Zhang Y, Herzberg EM, Chen YC, Gong M, Chien I, Zhang L, Murphy SN, Gollub RL, Grant PE, Ou Y. Mining multi-site clinical data to develop machine learning MRI biomarkers: application to neonatal hypoxic ischemic encephalopathy. J Transl Med 2019; 17:385. PubMed
• Machado I, Toews M, George E, Unadkat P, Essayed W, Luo J, Teodoro P, Carvalho H, Martins J, Golland P, Pieper S, Frisken S, Golby A, Wells Iii W, Ou Y. Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data. Neuroimage 2019; 202:116094.